Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tuaETeichuronic acid biosynthesis protein TuaE. (499 aa)    
Predicted Functional Partners:
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
  
  
 0.886
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.800
epsJ_2
Putative glycosyltransferase EpsJ.
  
  
 0.663
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.648
wecA_1
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
  
 
 0.648
wecA_2
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
  
 
 0.648
rfbM
Mannose-1-phosphate guanylyltransferase RfbM.
  
 
 0.632
OPJ66111.1
LicD family protein.
    
  0.600
tuaC
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
  
 
 0.592
OPJ66119.1
Putative glycosyl transferase.
  
 
 0.526
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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