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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ65885.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
OPJ59669.1
Putative transposase, YhgA-like.
  
     0.647
yycG_1
Sensor histidine kinase YycG.
 
     0.624
czcD
Cadmium, cobalt and zinc/H(+)-K(+) antiporter.
   
    0.613
OPJ62832.1
Acetyltransferase (GNAT) family protein.
  
     0.591
OPJ58243.1
Hypothetical protein.
  
  
 0.583
OPJ60251.1
Hypothetical protein.
  
  
 0.564
srrA_1
Transcriptional regulatory protein SrrA.
       0.550
OPJ65628.1
Hypothetical protein.
  
  
 0.545
yccM_1
Putative electron transport protein YccM.
 
     0.535
OPJ65888.1
Hypothetical protein.
       0.505
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.