STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpEThiosulfate sulfurtransferase GlpE. (106 aa)    
Predicted Functional Partners:
cdr_2
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
 
 
0.913
OPJ59482.1
Putative metallo-hydrolase.
  
 0.861
yflN
Putative metallo-hydrolase YflN.
  
 0.826
urdA
Urocanate reductase precursor.
  
 0.816
cdr_1
Coenzyme A disulfide reductase.
 
 
 0.808
gloB_3
Hydroxyacylglutathione hydrolase.
  
 0.795
aiiA
N-acyl homoserine lactonase.
  
 0.776
aiiB_1
N-acyl homoserine lactonase AiiB.
  
 0.776
aiiB_2
N-acyl homoserine lactonase AiiB.
  
 0.776
sodA_1
Superoxide dismutase.
   
 
 0.748
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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