Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mhqN_1Putative NAD(P)H nitroreductase MhqN. (205 aa)    
Predicted Functional Partners:
nasF
uroporphyrinogen-III C-methyltransferase.
  
 
 0.802
dfx_1
Desulfoferrodoxin.
     
 0.721
lcfB
long-chain-fatty-acid--CoA ligase.
   
 
 0.631
OPJ56717.1
ABC-2 family transporter protein.
  
  
 0.558
urdA
Urocanate reductase precursor.
 
  
 0.521
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.518
cdr_2
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.481
OPJ58408.1
Histidine phosphatase superfamily.
 
 
 0.461
gloA
Lactoylglutathione lyase.
  
    0.456
OPJ65814.1
Gluconeogenesis factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
 
 0.455
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.