Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ65944.1Small, acid-soluble spore protein beta. (68 aa)    
Predicted Functional Partners:
spoIIIAC
Stage III sporulation protein AC/AD protein family protein.
  
     0.717
mnmG_2
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG.
  
     0.625
trmFO
methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO.
  
     0.623
OPJ62345.1
Small, acid-soluble spore protein, alpha/beta type.
  
   
 0.592
spoVAD_2
Stage V sporulation protein AD.
  
  
 0.568
OPJ64101.1
LysM domain protein.
  
     0.526
spoIIR
Stage II sporulation protein SpoIIR.
  
   
 0.459
ssbB
Single-stranded DNA-binding protein B.
  
     0.452
OPJ63124.1
SpoVA protein.
  
  
 0.451
spoIIIAE
Stage III sporulation protein AE precursor.
  
     0.451
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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