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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ65870.1Hypothetical protein; N-terminal phage replisome organiser. (305 aa)    
Predicted Functional Partners:
OPJ54673.1
Signal peptidase (SPase) II.
  
     0.588
OPJ64112.1
Hypothetical protein.
  
     0.553
apeB
Putative M18 family aminopeptidase 2.
       0.503
OPJ65856.1
Hypothetical protein.
  
     0.501
OPJ63327.1
Cadherin-like beta sandwich domain protein.
  
     0.496
OPJ64696.1
Bacterial dynamin-like protein.
 
     0.492
OPJ65822.1
Transposase DDE domain protein.
  
     0.489
malT_1
HTH-type transcriptional regulator MalT.
  
     0.465
OPJ62313.1
Hypothetical protein.
  
     0.457
OPJ59547.1
Cadherin-like beta sandwich domain protein.
  
     0.454
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.