Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
csgDCsgBAC operon transcriptional regulatory protein. (252 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.761
patB_1
Cystathionine beta-lyase PatB.
    
   0.684
patB_2
Cystathionine beta-lyase PatB.
    
   0.684
OPJ65761.1
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.586
liaR
Transcriptional regulatory protein LiaR.
  
  
 0.523
degU
Transcriptional regulatory protein DegU.
  
  
 0.513
glnB_1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
    0.498
OPJ64688.1
NMT1/THI5 like protein.
  
     0.476
tpa_2
Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.447
pucR_5
Purine catabolism regulatory protein.
  
     0.437
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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