Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
OPJ65714.1Cyclomaltodextrinase; Belongs to the glycosyl hydrolase 13 family. (578 aa)    
Predicted Functional Partners:
pulA
Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family.
 
0.910
sacX
Negative regulator of SacY activity.
  
 
 0.882
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.882
bglF_2
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.882
ptsG_4
PTS system glucose-specific EIICBA component.
  
 
 0.882
bglF_4
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.882
ptsG_5
PTS system glucose-specific EIICBA component.
  
 
 0.882
cycB_2
Cyclodextrin-binding protein precursor.
 
  
 0.869
malG_2
Maltose transport system permease protein MalG.
 
  
 0.868
malF_2
Maltose transport system permease protein MalF.
 
  
 0.852
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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