Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ65585.1Enterobactin exporter EntS. (411 aa)    
Predicted Functional Partners:
OPJ65644.1
Hypothetical protein.
  
    0.594
OPJ57496.1
ABC-2 family transporter protein.
  
   
 0.572
pheA
P-protein.
  
 
 0.567
metH_1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.538
metH_2
Methionine synthase.
   
 
  0.538
bmr3_1
Multidrug resistance protein 3.
  
    0.515
yitJ
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase.
 
 
 0.489
OPJ62636.1
Hypothetical protein.
  
     0.485
OPJ58649.1
Hypothetical protein.
  
  
  0.467
hom
Homoserine dehydrogenase.
   
  0.463
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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