sigM protein (Clostridium chromiireducens) - STRING interaction network

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Score

sigM

RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)

Predicted Functional Partners:

OPJ65597.1

0.900

OPJ65598.1

0.839

OPJ65596.1

0.793

sigW_3

0.706

sigW_2

0.704

rpoB

0.685

rpoC

0.677

rpoA

0.667

rpoZ

0.628

sigJ

0.618

Your Current Organism:

Clostridium chromiireducens

NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ65596.1	OPJ65597.1	CLCHR_05800	CLCHR_05810	Hypothetical protein.	Hypothetical protein.	0.988
OPJ65596.1	OPJ65598.1	CLCHR_05800	CLCHR_05820	Hypothetical protein.	Hypothetical protein.	0.783
OPJ65596.1	sigM	CLCHR_05800	CLCHR_05830	Hypothetical protein.	RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.	0.793
OPJ65597.1	OPJ65596.1	CLCHR_05810	CLCHR_05800	Hypothetical protein.	Hypothetical protein.	0.988
OPJ65597.1	OPJ65598.1	CLCHR_05810	CLCHR_05820	Hypothetical protein.	Hypothetical protein.	0.839
OPJ65597.1	sigM	CLCHR_05810	CLCHR_05830	Hypothetical protein.	RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.	0.900
OPJ65598.1	OPJ65596.1	CLCHR_05820	CLCHR_05800	Hypothetical protein.	Hypothetical protein.	0.783
OPJ65598.1	OPJ65597.1	CLCHR_05820	CLCHR_05810	Hypothetical protein.	Hypothetical protein.	0.839
OPJ65598.1	sigM	CLCHR_05820	CLCHR_05830	Hypothetical protein.	RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.	0.839
rpoA	rpoB	CLCHR_00560	CLCHR_00200	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	CLCHR_00560	CLCHR_00210	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoZ	CLCHR_00560	CLCHR_07480	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.996
rpoA	sigJ	CLCHR_00560	CLCHR_41470	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family. ECF subfamily.	0.667
rpoA	sigM	CLCHR_00560	CLCHR_05830	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.	0.667
rpoA	sigW_2	CLCHR_00560	CLCHR_16170	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.	0.667
rpoA	sigW_3	CLCHR_00560	CLCHR_18710	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.	0.667
rpoB	rpoA	CLCHR_00200	CLCHR_00560	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	CLCHR_00200	CLCHR_00210	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	CLCHR_00200	CLCHR_07480	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.992
rpoB	sigJ	CLCHR_00200	CLCHR_41470	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family. ECF subfamily.	0.685