Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ65596.1 | OPJ65597.1 | CLCHR_05800 | CLCHR_05810 | Hypothetical protein. | Hypothetical protein. | 0.990 |
| OPJ65596.1 | OPJ65598.1 | CLCHR_05800 | CLCHR_05820 | Hypothetical protein. | Hypothetical protein. | 0.786 |
| OPJ65596.1 | sigM | CLCHR_05800 | CLCHR_05830 | Hypothetical protein. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.796 |
| OPJ65597.1 | OPJ65596.1 | CLCHR_05810 | CLCHR_05800 | Hypothetical protein. | Hypothetical protein. | 0.990 |
| OPJ65597.1 | OPJ65598.1 | CLCHR_05810 | CLCHR_05820 | Hypothetical protein. | Hypothetical protein. | 0.835 |
| OPJ65597.1 | sigM | CLCHR_05810 | CLCHR_05830 | Hypothetical protein. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.898 |
| OPJ65598.1 | OPJ65596.1 | CLCHR_05820 | CLCHR_05800 | Hypothetical protein. | Hypothetical protein. | 0.786 |
| OPJ65598.1 | OPJ65597.1 | CLCHR_05820 | CLCHR_05810 | Hypothetical protein. | Hypothetical protein. | 0.835 |
| OPJ65598.1 | sigM | CLCHR_05820 | CLCHR_05830 | Hypothetical protein. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.835 |
| cheR2_1 | sigM | CLCHR_04030 | CLCHR_05830 | Chemotaxis protein methyltransferase cher2. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.691 |
| cheR2_1 | sigW_2 | CLCHR_04030 | CLCHR_16170 | Chemotaxis protein methyltransferase cher2. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.691 |
| cheR2_1 | sigW_3 | CLCHR_04030 | CLCHR_18710 | Chemotaxis protein methyltransferase cher2. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.691 |
| rpoA | rpoB | CLCHR_00560 | CLCHR_00200 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoC | CLCHR_00560 | CLCHR_00210 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoZ | CLCHR_00560 | CLCHR_07480 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.998 |
| rpoA | sigM | CLCHR_00560 | CLCHR_05830 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.711 |
| rpoA | sigW_2 | CLCHR_00560 | CLCHR_16170 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.711 |
| rpoA | sigW_3 | CLCHR_00560 | CLCHR_18710 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.711 |
| rpoB | rpoA | CLCHR_00200 | CLCHR_00560 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoC | CLCHR_00200 | CLCHR_00210 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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