Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
OPJ65607.1SpoVA protein. (159 aa)    
Predicted Functional Partners:
spoVAD_1
Stage V sporulation protein AD.
 
  
 0.980
OPJ65606.1
Hypothetical protein.
 
  
 0.941
spoVAD_2
Stage V sporulation protein AD.
 
  
 0.917
OPJ65605.1
Hypothetical protein.
 
     0.892
gpr_2
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.876
spoVAE
SpoVA protein.
 
  
0.873
gerAA
Spore germination protein A1.
 
  
 0.833
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.800
spoIVB
SpoIVB peptidase precursor.
 
   
 0.800
sleB
Spore cortex-lytic enzyme precursor.
  
  
 0.797
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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