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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ65627.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
macB_7
Macrolide export ATP-binding/permease protein MacB.
  
 0.939
macB_8
Macrolide export ATP-binding/permease protein MacB.
  
 0.939
macB_2
Macrolide export ATP-binding/permease protein MacB.
  
 0.876
OPJ62949.1
Putative ABC transporter ATP-binding protein.
  
 0.876
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.872
lolD_3
Lipoprotein-releasing system ATP-binding protein LolD.
  
 0.872
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
  
 0.870
macB_4
Macrolide export ATP-binding/permease protein MacB.
  
 0.870
macB_6
Macrolide export ATP-binding/permease protein MacB.
  
 0.870
cysA_2
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
  
 0.870
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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