STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mglB_2D-galactose-binding periplasmic protein precursor. (345 aa)    
Predicted Functional Partners:
mglC
Galactoside transport system permease protein MglC.
 
 
 0.939
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.898
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.875
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.875
rpfC_1
Sensory/regulatory protein RpfC.
   
 0.875
OPJ60927.1
Response regulator receiver domain protein.
   
 0.839
rbsC
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.784
rbsA_1
Ribose import ATP-binding protein RbsA.
 
 0.781
cheV
Chemotaxis protein CheV.
   
 0.779
ytfT
Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 
 0.778
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.