Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
mglB_2D-galactose-binding periplasmic protein precursor. (345 aa)    
Predicted Functional Partners:
mglC
Galactoside transport system permease protein MglC.
 
 
 0.922
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.888
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.828
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.828
rpfC_1
Sensory/regulatory protein RpfC.
   
 0.828
OPJ60927.1
Response regulator receiver domain protein.
   
 0.822
rbsC
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.778
ytfT
Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 
 0.772
yjfF
Inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
 0.765
rbsA_1
Ribose import ATP-binding protein RbsA.
 
 0.758
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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