Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ65449.1 | OPJ65451.1 | CLCHR_08390 | CLCHR_08410 | FMN-binding domain protein. | Hypothetical protein. | 0.516 |
| OPJ65449.1 | mshD_1 | CLCHR_08390 | CLCHR_08400 | FMN-binding domain protein. | Mycothiol acetyltransferase. | 0.780 |
| OPJ65451.1 | OPJ65449.1 | CLCHR_08410 | CLCHR_08390 | Hypothetical protein. | FMN-binding domain protein. | 0.516 |
| OPJ65451.1 | mshD_1 | CLCHR_08410 | CLCHR_08400 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.553 |
| argJ | lysA | CLCHR_18090 | CLCHR_04320 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.523 |
| argJ | mshD_1 | CLCHR_18090 | CLCHR_08400 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Mycothiol acetyltransferase. | 0.427 |
| argJ | nspC | CLCHR_18090 | CLCHR_27080 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Carboxynorspermidine/carboxyspermidine decarboxylase. | 0.476 |
| dpaL | mshD_1 | CLCHR_22290 | CLCHR_08400 | Diaminopropionate ammonia-lyase. | Mycothiol acetyltransferase. | 0.470 |
| dpaL | puuR_2 | CLCHR_22290 | CLCHR_22300 | Diaminopropionate ammonia-lyase. | HTH-type transcriptional regulator PuuR. | 0.416 |
| lysA | argJ | CLCHR_04320 | CLCHR_18090 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.523 |
| lysA | mshD_1 | CLCHR_04320 | CLCHR_08400 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Mycothiol acetyltransferase. | 0.480 |
| mshD_1 | OPJ65449.1 | CLCHR_08400 | CLCHR_08390 | Mycothiol acetyltransferase. | FMN-binding domain protein. | 0.780 |
| mshD_1 | OPJ65451.1 | CLCHR_08400 | CLCHR_08410 | Mycothiol acetyltransferase. | Hypothetical protein. | 0.553 |
| mshD_1 | argJ | CLCHR_08400 | CLCHR_18090 | Mycothiol acetyltransferase. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.427 |
| mshD_1 | dpaL | CLCHR_08400 | CLCHR_22290 | Mycothiol acetyltransferase. | Diaminopropionate ammonia-lyase. | 0.470 |
| mshD_1 | lysA | CLCHR_08400 | CLCHR_04320 | Mycothiol acetyltransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.480 |
| mshD_1 | nspC | CLCHR_08400 | CLCHR_27080 | Mycothiol acetyltransferase. | Carboxynorspermidine/carboxyspermidine decarboxylase. | 0.480 |
| mshD_1 | puuR_1 | CLCHR_08400 | CLCHR_19330 | Mycothiol acetyltransferase. | HTH-type transcriptional regulator PuuR. | 0.470 |
| mshD_1 | puuR_2 | CLCHR_08400 | CLCHR_22300 | Mycothiol acetyltransferase. | HTH-type transcriptional regulator PuuR. | 0.468 |
| mshD_1 | sulD | CLCHR_08400 | CLCHR_00840 | Mycothiol acetyltransferase. | Bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.426 |
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