Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ65356.1ABC transporter substrate binding protein. (337 aa)    
Predicted Functional Partners:
OPJ65357.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.995
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
    0.965
barA_2
Signal transduction histidine-protein kinase BarA.
    
  0.865
fliN
Flagellar motor switch protein FliN.
   
 
  0.802
OPJ64736.1
Stage II sporulation protein SpoIIE.
 
 
  0.778
cheY_2
Chemotaxis protein CheY.
    
  0.648
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
  0.600
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
  0.600
rpfC_1
Sensory/regulatory protein RpfC.
    
  0.600
OPJ65355.1
HutP.
 
     0.563
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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