Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ywqD_1Tyrosine-protein kinase YwqD. (241 aa)    
Predicted Functional Partners:
cap8A_1
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 0.988
cap8A_2
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 0.983
ywqE_1
Tyrosine-protein phosphatase YwqE.
  
 0.972
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.941
ywqE_2
Tyrosine-protein phosphatase YwqE.
  
 0.886
wecA_1
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
 
 
 0.852
wecA_2
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
 
 
 0.761
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
 
 0.755
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.742
ywqD_3
Tyrosine-protein kinase YwqD.
  
 0.690
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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