yocH_1 protein (Clostridium chromiireducens)

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Score

yocH_1

Cell wall-binding protein YocH precursor. (380 aa)

Predicted Functional Partners:

rsmA_1

0.803

rnmV

0.781

ycfH

0.681

rfbB_2

0.644

rffG

0.644

OPJ65778.1

0.626

OPJ61467.1

0.626

iap_1

0.622

lytB_10

0.608

OPJ61469.1

0.600

Your Current Organism:

Clostridium chromiireducens

NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ61467.1	OPJ61469.1	CLCHR_24470	CLCHR_24490	Hypothetical protein.	Hypothetical protein.	0.866
OPJ61467.1	yocH_1	CLCHR_24470	CLCHR_09730	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.626
OPJ61469.1	OPJ61467.1	CLCHR_24490	CLCHR_24470	Hypothetical protein.	Hypothetical protein.	0.866
OPJ61469.1	yocH_1	CLCHR_24490	CLCHR_09730	Hypothetical protein.	Cell wall-binding protein YocH precursor.	0.600
OPJ65778.1	iap_1	CLCHR_03510	CLCHR_35510	Putative endopeptidase precursor.	Putative endopeptidase p60 precursor.	0.525
OPJ65778.1	lytB_10	CLCHR_03510	CLCHR_40820	Putative endopeptidase precursor.	Putative endo-beta-N-acetylglucosaminidase precursor.	0.617
OPJ65778.1	yocH_1	CLCHR_03510	CLCHR_09730	Putative endopeptidase precursor.	Cell wall-binding protein YocH precursor.	0.626
iap_1	OPJ65778.1	CLCHR_35510	CLCHR_03510	Putative endopeptidase p60 precursor.	Putative endopeptidase precursor.	0.525
iap_1	lytB_10	CLCHR_35510	CLCHR_40820	Putative endopeptidase p60 precursor.	Putative endo-beta-N-acetylglucosaminidase precursor.	0.617
iap_1	yocH_1	CLCHR_35510	CLCHR_09730	Putative endopeptidase p60 precursor.	Cell wall-binding protein YocH precursor.	0.622
lytB_10	OPJ65778.1	CLCHR_40820	CLCHR_03510	Putative endo-beta-N-acetylglucosaminidase precursor.	Putative endopeptidase precursor.	0.617
lytB_10	iap_1	CLCHR_40820	CLCHR_35510	Putative endo-beta-N-acetylglucosaminidase precursor.	Putative endopeptidase p60 precursor.	0.617
lytB_10	yocH_1	CLCHR_40820	CLCHR_09730	Putative endo-beta-N-acetylglucosaminidase precursor.	Cell wall-binding protein YocH precursor.	0.608
rfbB_2	yocH_1	CLCHR_22960	CLCHR_09730	dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.	Cell wall-binding protein YocH precursor.	0.644
rffG	yocH_1	CLCHR_34240	CLCHR_09730	dTDP-glucose 4,6-dehydratase 2; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.	Cell wall-binding protein YocH precursor.	0.644
rnmV	rsmA_1	CLCHR_09740	CLCHR_09750	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.941
rnmV	ycfH	CLCHR_09740	CLCHR_09720	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Putative deoxyribonuclease YcfH.	0.718
rnmV	yocH_1	CLCHR_09740	CLCHR_09730	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	Cell wall-binding protein YocH precursor.	0.781
rsmA_1	rnmV	CLCHR_09750	CLCHR_09740	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.941
rsmA_1	ycfH	CLCHR_09750	CLCHR_09720	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Putative deoxyribonuclease YcfH.	0.722