STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhFFormate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (713 aa)    
Predicted Functional Partners:
hndC
NADP-reducing hydrogenase subunit HndC.
 
 0.988
hyfA_2
Hydrogenase-4 component A.
 
 0.987
hyfA_1
Hydrogenase-4 component A.
 
 0.984
fdhD
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
 
 
 0.977
nasD_3
Nitrite reductase.
 
 0.973
hndD_1
NADP-reducing hydrogenase subunit HndC.
  
 0.965
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.965
OPJ56085.1
Iron hydrogenase 1.
  
 0.965
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
  
 0.965
moeA
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
 0.964
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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