Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tauB_2Taurine import ATP-binding protein TauB. (255 aa)    
Predicted Functional Partners:
ssuC_5
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.987
OPJ63660.1
Hypothetical protein.
 
 0.974
ssuC_8
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.971
ssuC_13
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.937
OPJ63725.1
Hypothetical protein.
 
 0.929
OPJ57657.1
Hypothetical protein.
 
 0.921
ssuC_4
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.860
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.858
ssuC_10
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.848
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.847
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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