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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malT_2HTH-type transcriptional regulator MalT. (861 aa)    
Predicted Functional Partners:
OPJ63324.1
ABC-2 type transporter.
 
     0.861
OPJ63325.1
ABC-2 type transporter.
 
     0.807
OPJ65761.1
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.705
liaR
Transcriptional regulatory protein LiaR.
  
  
 0.590
degU
Transcriptional regulatory protein DegU.
  
  
 0.583
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
     0.528
mazG
Nucleoside triphosphate pyrophosphohydrolase.
  
  
  0.500
cmk_4
Cytidylate kinase.
  
 
  0.484
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
  0.467
dgt
Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
    
  0.423
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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