Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
znuA_1High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. (298 aa)    
Predicted Functional Partners:
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
 
 
 0.990
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
 
 0.988
OPJ62485.1
Putative two-component membrane permease complex subunit.
 
  
 0.747
yusV
Putative siderophore transport system ATP-binding protein YusV.
 
  
 0.667
mntR_1
Transcriptional regulator MntR.
  
 
 0.643
mntR_2
Transcriptional regulator MntR.
  
 
 0.643
rpsN1
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.613
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.563
yjiA
Putative GTP-binding protein YjiA.
  
  
 0.531
yciC
Putative metal chaperone YciC.
  
  
 0.531
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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