Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mglB_9D-galactose-binding periplasmic protein precursor. (204 aa)    
Predicted Functional Partners:
mglC
Galactoside transport system permease protein MglC.
 
 
 0.931
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.834
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.828
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.828
rpfC_1
Sensory/regulatory protein RpfC.
   
 0.828
OPJ60927.1
Response regulator receiver domain protein.
   
 0.822
yehU_4
Sensor histidine kinase YehU.
 
   0.749
OPJ60917.1
Putative response regulatory protein.
 
  
  0.739
rbsA_1
Ribose import ATP-binding protein RbsA.
  
 0.724
xylG_1
Xylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
  
 0.724
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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