Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
yjmB_1Putative symporter YjmB. (467 aa)    
Predicted Functional Partners:
melB
Melibiose carrier protein.
 
     0.824
nrdA
Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.768
OPJ62512.1
Beta-galactosidase BoGH2A precursor; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.725
OPJ62517.1
Acetyl esterase.
     
 0.565
xynB_3
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.550
xynB_4
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.490
xynB_2
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.487
cbgA
Beta-galactosidase.
 
 
 0.476
bglX
Periplasmic beta-glucosidase precursor; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.475
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.473
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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