Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ62078.1Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (310 aa)    
Predicted Functional Partners:
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 
 0.991
OPJ62081.1
Purine-binding protein precursor.
 
 
 0.990
OPJ62079.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.970
mglA_3
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 
 0.962
tmpC_2
Membrane lipoprotein TmpC precursor.
 
 
 0.961
OPJ58536.1
Beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.959
rbsA_2
Ribose import ATP-binding protein RbsA.
 
 
 0.951
tmpC_1
Membrane lipoprotein TmpC precursor.
 
 
 0.924
OPJ63897.1
D-allose transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
 
0.885
ndhF
Nicotinate dehydrogenase FAD-subunit.
       0.641
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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