Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
frdAFumarate reductase flavoprotein subunit. (569 aa)    
Predicted Functional Partners:
OPJ61231.1
Ferredoxin-2.
 
 
 0.993
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.991
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
  
 0.991
puuB_1
Gamma-glutamylputrescine oxidoreductase.
  
 0.982
puuB_2
Gamma-glutamylputrescine oxidoreductase.
  
 0.982
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.978
cysD
Sulfate adenylyltransferase subunit 2.
 
  
 0.975
hndC
NADP-reducing hydrogenase subunit HndC.
  
 0.972
OPJ58257.1
NADH oxidase.
  
 0.955
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.953
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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