STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaBAscorbate-specific phosphotransferase enzyme IIB component. (94 aa)    
Predicted Functional Partners:
ulaC
Ascorbate-specific phosphotransferase enzyme IIA component.
 
 
 0.998
ulaA
Ascorbate-specific permease IIC component UlaA.
 
 
 0.997
licR_2
Putative licABCH operon regulator.
 
 
 0.973
licR_1
Putative licABCH operon regulator.
 
 
 0.938
gatC_1
Galactitol permease IIC component.
 
 
 0.896
mtlR
Transcriptional regulator MtlR.
 
 
 0.893
ulaG
Putative L-ascorbate-6-phosphate lactonase UlaG.
  
 
 0.849
ptsH
Phosphocarrier protein HPr.
    
 0.847
fruA_4
PTS system fructose-specific EIIABC component.
 
 
 0.831
fruA_3
PTS system fructose-specific EIIABC component.
 
 
 0.794
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.