Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hypBA1_2Non-reducing end beta-L-arabinofuranosidase. (758 aa)    
Predicted Functional Partners:
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
   
 0.782
OPJ57695.1
Extracellular endo-alpha-(1->5)-L-arabinanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.768
OPJ54723.1
Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.764
agaA
Alpha-galactosidase A precursor.
 
   
 0.760
xynD
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
   
 0.749
xsa
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.745
OPJ66067.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.716
xynC
Endo-1,4-beta-xylanase C precursor.
 
  
 0.706
OPJ66097.1
Hypothetical protein.
  
     0.665
aguA_3
Xylan alpha-(1->2)-glucuronosidase; Belongs to the glycosyl hydrolase 67 family.
  
     0.648
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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