STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaC_2DNA replication protein DnaC. (327 aa)    
Predicted Functional Partners:
OPJ59887.1
Replication initiation and membrane attachment.
 
  
 0.967
OPJ62326.1
Hypothetical protein.
  
     0.738
dnaC_1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.729
dnaC_3
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.729
OPJ63500.1
Hypothetical protein; 8-oxoguanine DNA glycosylase, N-terminal domain.
  
     0.701
OPJ66205.1
YbbR-like protein.
 
     0.651
OPJ61487.1
Hypothetical protein.
  
     0.565
ssbB
Single-stranded DNA-binding protein B.
 
   
 0.522
OPJ65537.1
Hypothetical protein.
  
     0.516
scfA
Hypothetical protein.
  
     0.492
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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