Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ecsAABC-type transporter ATP-binding protein EcsA. (243 aa)    
Predicted Functional Partners:
OPJ59301.1
Hypothetical protein.
 
    0.973
lolD_3
Lipoprotein-releasing system ATP-binding protein LolD.
 
  
0.818
OPJ60423.1
ABC-2 family transporter protein.
  
 0.804
OPJ59820.1
ABC-2 family transporter protein.
  
 0.804
OPJ57496.1
ABC-2 family transporter protein.
  
 0.804
cmpC
Bicarbonate transport ATP-binding protein CmpC.
 
   
 
0.685
artM_1
Arginine transport ATP-binding protein ArtM.
 
   
 
0.660
glnQ_1
Glutamine transport ATP-binding protein GlnQ.
 
  
 
0.657
drrB
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
  
 
 0.632
ybhR
Inner membrane transport permease YbhR.
  
 
 0.632
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.