Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OPJ59267.1Subtilase family protein. (611 aa)    
Predicted Functional Partners:
OPJ59266.1
Subtilase family protein.
 
    
0.802
OPJ58119.1
Putative peptidoglycan binding domain protein.
 
     0.785
adhE_1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
  0.753
adhE_3
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
  0.753
cbf2
Putative peptidyl-prolyl cis-trans isomerase Cbf2 precursor.
  
 
 0.719
prsA3
Foldase protein PrsA 3 precursor.
   
 
 0.683
ssbB
Single-stranded DNA-binding protein B.
 
     0.647
OPJ57518.1
Hypothetical protein.
  
     0.645
OPJ62345.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.611
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
  
 0.575
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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