yhbY protein (Clostridium chromiireducens) - STRING interaction network

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Score

yhbY

RNA-binding protein YhbY. (100 aa)

Predicted Functional Partners:

nadD

0.937

OPJ59077.1

0.837

rplK

0.802

obg

0.669

aroE

0.572

rng

0.557

infA

0.526

rplU

0.522

rimP

0.512

rpmA

0.506

Your Current Organism:

Clostridium chromiireducens

NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ59077.1	aroE	CLCHR_36800	CLCHR_45690	Putative nicotinate-nucleotide adenylyltransferase.	Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	0.697
OPJ59077.1	nadD	CLCHR_36800	CLCHR_36790	Putative nicotinate-nucleotide adenylyltransferase.	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.997
OPJ59077.1	obg	CLCHR_36800	CLCHR_36770	Putative nicotinate-nucleotide adenylyltransferase.	GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.482
OPJ59077.1	rng	CLCHR_36800	CLCHR_36730	Putative nicotinate-nucleotide adenylyltransferase.	Ribonuclease G.	0.443
OPJ59077.1	rplU	CLCHR_36800	CLCHR_36740	Putative nicotinate-nucleotide adenylyltransferase.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.423
OPJ59077.1	rpmA	CLCHR_36800	CLCHR_36760	Putative nicotinate-nucleotide adenylyltransferase.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.423
OPJ59077.1	yhbY	CLCHR_36800	CLCHR_36780	Putative nicotinate-nucleotide adenylyltransferase.	RNA-binding protein YhbY.	0.837
aroE	OPJ59077.1	CLCHR_45690	CLCHR_36800	Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	Putative nicotinate-nucleotide adenylyltransferase.	0.697
aroE	nadD	CLCHR_45690	CLCHR_36790	Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.851
aroE	yhbY	CLCHR_45690	CLCHR_36780	Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	RNA-binding protein YhbY.	0.572
infA	rimP	CLCHR_00510	CLCHR_06780	Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.545
infA	rplK	CLCHR_00510	CLCHR_00160	Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.974
infA	rplU	CLCHR_00510	CLCHR_36740	Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.851
infA	rpmA	CLCHR_00510	CLCHR_36760	Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.659
infA	yhbY	CLCHR_00510	CLCHR_36780	Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	RNA-binding protein YhbY.	0.526
nadD	OPJ59077.1	CLCHR_36790	CLCHR_36800	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Putative nicotinate-nucleotide adenylyltransferase.	0.997
nadD	aroE	CLCHR_36790	CLCHR_45690	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	0.851
nadD	obg	CLCHR_36790	CLCHR_36770	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.683
nadD	rng	CLCHR_36790	CLCHR_36730	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	Ribonuclease G.	0.519
nadD	rplU	CLCHR_36790	CLCHR_36740	Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.565