Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ58243.1Hypothetical protein. (367 aa)    
Predicted Functional Partners:
fliN
Flagellar motor switch protein FliN.
   
 
 0.845
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.792
OPJ56701.1
Hypothetical protein.
 
     0.729
udk_1
Uridine kinase.
    
  0.715
OPJ61872.1
Hypothetical protein.
  
 
 0.677
OPJ66097.1
Hypothetical protein.
  
 0.669
OPJ65628.1
Hypothetical protein.
  
 0.669
OPJ64951.1
Collagen triple helix repeat.
  
 0.669
OPJ63671.1
Hypothetical protein.
  
 0.669
OPJ59422.1
Flavastacin precursor.
  
 0.669
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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