Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
OPJ57747.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
mmgC
acyl-CoA dehydrogenase.
  
 0.944
cat1
succinyl-CoA:coenzyme A transferase.
  
 
 0.929
abfD
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-delta-isomerase.
    
 0.922
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.899
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.899
echA8
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.893
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
     
 0.890
adhE_1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.842
adhE_3
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.842
acdA_1
acyl-CoA dehydrogenase.
  
 0.809
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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