Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lytA_23Autolysin. (376 aa)    
Predicted Functional Partners:
OPJ66046.1
Choline/ethanolamine kinase.
  
     0.631
OPJ57465.1
Hypothetical protein.
       0.536
cwlC_1
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
  
  
  0.518
OPJ62638.1
CAAX amino terminal protease self- immunity.
  
     0.502
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.494
cmk_4
Cytidylate kinase.
    
  0.494
cwlC_3
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
  
  
  0.481
spsI_2
Bifunctional IPC transferase and DIPP synthase.
  
     0.480
cwlC_2
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
  
  
  0.476
spsI_1
Bifunctional IPC transferase and DIPP synthase.
  
    0.463
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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