Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
csd_2Putative cysteine desulfurase. (379 aa)    
Predicted Functional Partners:
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
 0.948
OPJ57889.1
Hypothetical protein.
  
 0.914
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
  
 0.778
iscS_2
Cysteine desulfurase IscS.
 
 
0.758
trxB_2
Thioredoxin reductase.
  
 
  0.725
trxB_3
Thioredoxin reductase.
  
 
  0.725
trxB_4
Thioredoxin reductase.
 
 
  0.713
trxB_5
Thioredoxin reductase.
 
 
  0.711
cdr_2
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
   
 0.681
OPJ57514.1
Hypothetical protein.
    
   0.678
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.