STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sunS_2SPBc2 prophage-derived glycosyltransferase SunS. (358 aa)    
Predicted Functional Partners:
OPJ55355.1
Collagen triple helix repeat.
 
   
 0.736
tam_2
Trans-aconitate 2-methyltransferase.
 
 0.675
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.526
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
 
 0.516
OPJ62636.1
Hypothetical protein.
   
 0.511
OPJ65591.1
Hypothetical protein.
  
 
 0.495
arnT_1
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
  
 
 0.495
arnT_2
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
  
 
 0.495
rfbF
Glucose-1-phosphate cytidylyltransferase.
  
 0.495
OPJ57329.1
Hypothetical protein.
  
 
 0.495
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.