Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ57358.1Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (90 aa)    
Predicted Functional Partners:
spoIIAB_2
Anti-sigma F factor.
 
 0.995
barA_2
Signal transduction histidine-protein kinase BarA.
 
 
 0.989
OPJ64736.1
Stage II sporulation protein SpoIIE.
  
 0.987
spoIIAB_1
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
 0.981
fliN
Flagellar motor switch protein FliN.
  
   0.944
rsbP
Phosphoserine phosphatase RsbP.
 
 0.932
fliG
Flagellar motor switch protein FliG.
  
   0.925
flgG_3
Flagellar basal-body rod protein FlgG.
   
    0.900
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 0.856
rpfC_1
Sensory/regulatory protein RpfC.
 
 
 0.854
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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