STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPUL_005034TP6A_N domain-containing protein. (349 aa)    
Predicted Functional Partners:
EPUL_003913
WD40 repeat-like protein.
    
 
 0.898
EPUL_001607
P-loop containing nucleoside triphosphate hydrolase; Belongs to the RecA family.
    
 0.811
EPUL_002913
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
    
 0.803
EPUL_003314
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
   
 0.765
EPUL_004888
Uncharacterized protein.
    
 0.757
EPUL_001453
ERCC4 domain-containing protein.
    
 
 0.741
EPUL_001684
RECA_2 domain-containing protein.
    
 0.731
EPUL_001850
RECA_2 domain-containing protein.
    
 0.721
EPUL_002118
Uncharacterized protein.
    
 
 0.695
EPUL_001504
Uncharacterized protein.
   
 
 0.633
Your Current Organism:
Erysiphe pulchra
NCBI taxonomy Id: 225359
Other names: E. pulchra, Microsphaera pulchra
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