EPUL_005078 protein (Erysiphe pulchra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EPUL_005078

NAD(P)-binding Rossmann-fold containing protein. (265 aa)

Predicted Functional Partners:

EPUL_005438

0.767

EPUL_006137

0.682

EPUL_002043

0.611

EPUL_001746

0.599

EPUL_006165

0.598

EPUL_004361

0.586

EPUL_002986

0.586

EPUL_000927

0.580

EPUL_003292

0.565

EPUL_003804

0.564

Your Current Organism:

Erysiphe pulchra

NCBI taxonomy Id: 225359
Other names: E. pulchra, Microsphaera pulchra

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EPUL_000927	EPUL_002043	A0A2S4Q250	A0A2S4PT70	Pex2_Pex12 domain-containing protein.	TPR_REGION domain-containing protein.	0.987
EPUL_000927	EPUL_003804	A0A2S4Q250	A0A2S4Q103	Pex2_Pex12 domain-containing protein.	Pex14_N domain-containing protein.	0.934
EPUL_000927	EPUL_005078	A0A2S4Q250	A0A2S4PQ19	Pex2_Pex12 domain-containing protein.	NAD(P)-binding Rossmann-fold containing protein.	0.580
EPUL_001746	EPUL_005078	A0A2S4PZ67	A0A2S4PQ19	FSH1 domain-containing protein.	NAD(P)-binding Rossmann-fold containing protein.	0.599
EPUL_002043	EPUL_000927	A0A2S4PT70	A0A2S4Q250	TPR_REGION domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.987
EPUL_002043	EPUL_003804	A0A2S4PT70	A0A2S4Q103	TPR_REGION domain-containing protein.	Pex14_N domain-containing protein.	0.993
EPUL_002043	EPUL_005078	A0A2S4PT70	A0A2S4PQ19	TPR_REGION domain-containing protein.	NAD(P)-binding Rossmann-fold containing protein.	0.611
EPUL_002986	EPUL_005078	A0A2S4PS65	A0A2S4PQ19	Ferredoxin.	NAD(P)-binding Rossmann-fold containing protein.	0.586
EPUL_002986	EPUL_005438	A0A2S4PS65	A0A2S4PS01	Ferredoxin.	GroES-like protein.	0.660
EPUL_002986	EPUL_006137	A0A2S4PS65	A0A2S4PPN6	Ferredoxin.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.888
EPUL_003292	EPUL_005078	A0A2S4PRH0	A0A2S4PQ19	BUD22 domain-containing protein.	NAD(P)-binding Rossmann-fold containing protein.	0.565
EPUL_003804	EPUL_000927	A0A2S4Q103	A0A2S4Q250	Pex14_N domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.934
EPUL_003804	EPUL_002043	A0A2S4Q103	A0A2S4PT70	Pex14_N domain-containing protein.	TPR_REGION domain-containing protein.	0.993
EPUL_003804	EPUL_005078	A0A2S4Q103	A0A2S4PQ19	Pex14_N domain-containing protein.	NAD(P)-binding Rossmann-fold containing protein.	0.564
EPUL_004361	EPUL_005078	A0A2S4PP04	A0A2S4PQ19	Thiolase-like protein.	NAD(P)-binding Rossmann-fold containing protein.	0.586
EPUL_004361	EPUL_006137	A0A2S4PP04	A0A2S4PPN6	Thiolase-like protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.533
EPUL_004361	EPUL_006165	A0A2S4PP04	A0A2S4PJ30	Thiolase-like protein.	Malonyl CoA-acyl carrier protein-like protein transacylase.	0.994
EPUL_005078	EPUL_000927	A0A2S4PQ19	A0A2S4Q250	NAD(P)-binding Rossmann-fold containing protein.	Pex2_Pex12 domain-containing protein.	0.580
EPUL_005078	EPUL_001746	A0A2S4PQ19	A0A2S4PZ67	NAD(P)-binding Rossmann-fold containing protein.	FSH1 domain-containing protein.	0.599
EPUL_005078	EPUL_002043	A0A2S4PQ19	A0A2S4PT70	NAD(P)-binding Rossmann-fold containing protein.	TPR_REGION domain-containing protein.	0.611