STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPUL_003243Cleavage and polyadenylation specificity factor. (271 aa)    
Predicted Functional Partners:
EPUL_000979
YTH domain-containing protein.
    
 0.997
EPUL_000134
Fip1 domain-containing protein.
   
 0.976
EPUL_003551
Uncharacterized protein.
    
 0.973
EPUL_002817
Uncharacterized protein.
    
 0.909
EPUL_003636
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.882
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.853
EPUL_003925
RRM domain-containing protein.
   
 0.850
EPUL_003511
TPR_REGION domain-containing protein.
   
 
 0.830
EPUL_000279
Uncharacterized protein.
   
 0.824
EPUL_002857
Metallo-hydrolase/oxidoreductase.
   
 
 0.817
Your Current Organism:
Erysiphe pulchra
NCBI taxonomy Id: 225359
Other names: E. pulchra, Microsphaera pulchra
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.