STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPUL_001641Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
EPUL_004456
Uncharacterized protein.
    
 0.708
EPUL_004629
Uncharacterized protein.
    
 0.684
EPUL_001453
ERCC4 domain-containing protein.
    
 0.680
EPUL_002794
DNA polymerase.
   
 0.677
EPUL_003317
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.651
EPUL_000603
WD_REPEATS_REGION domain-containing protein.
    
  0.639
EPUL_004507
Small nuclear ribonucleoprotein G.
    
  0.626
EPUL_001492
DNA repair protein.
    
 0.625
EPUL_001767
Uncharacterized protein.
    
 0.606
EPUL_002264
Uncharacterized protein.
    
  0.590
Your Current Organism:
Erysiphe pulchra
NCBI taxonomy Id: 225359
Other names: E. pulchra, Microsphaera pulchra
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