Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EPUL_000028 | EPUL_000056 | A0A2S4Q2A4 | A0A2S4Q2C7 | Uncharacterized protein. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.940 |
EPUL_000028 | EPUL_000635 | A0A2S4Q2A4 | A0A2S4PYB1 | Uncharacterized protein. | Nucleolar protein. | 0.952 |
EPUL_000028 | EPUL_000991 | A0A2S4Q2A4 | A0A2S4Q1W4 | Uncharacterized protein. | Uncharacterized protein. | 0.992 |
EPUL_000028 | EPUL_001561 | A0A2S4Q2A4 | A0A2S4PWQ8 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.993 |
EPUL_000028 | EPUL_002498 | A0A2S4Q2A4 | A0A2S4PUG3 | Uncharacterized protein. | RNA helicase. | 0.988 |
EPUL_000028 | EPUL_004562 | A0A2S4Q2A4 | A0A2S4PQY3 | Uncharacterized protein. | RRM domain-containing protein. | 0.994 |
EPUL_000028 | ERB1 | A0A2S4Q2A4 | A0A2S4Q1P0 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.994 |
EPUL_000028 | NOP7 | A0A2S4Q2A4 | A0A2S4PMS9 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
EPUL_000028 | SPB1 | A0A2S4Q2A4 | A0A2S4Q2A6 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.989 |
EPUL_000028 | YTM1 | A0A2S4Q2A4 | A0A2S4PZC9 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
EPUL_000056 | EPUL_000028 | A0A2S4Q2C7 | A0A2S4Q2A4 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Uncharacterized protein. | 0.940 |
EPUL_000056 | EPUL_000635 | A0A2S4Q2C7 | A0A2S4PYB1 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Nucleolar protein. | 0.794 |
EPUL_000056 | EPUL_000991 | A0A2S4Q2C7 | A0A2S4Q1W4 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Uncharacterized protein. | 0.843 |
EPUL_000056 | EPUL_001561 | A0A2S4Q2C7 | A0A2S4PWQ8 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.837 |
EPUL_000056 | EPUL_002498 | A0A2S4Q2C7 | A0A2S4PUG3 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | RNA helicase. | 0.593 |
EPUL_000056 | EPUL_004562 | A0A2S4Q2C7 | A0A2S4PQY3 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | RRM domain-containing protein. | 0.989 |
EPUL_000056 | ERB1 | A0A2S4Q2C7 | A0A2S4Q1P0 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.666 |
EPUL_000056 | NOP7 | A0A2S4Q2C7 | A0A2S4PMS9 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
EPUL_000056 | SPB1 | A0A2S4Q2C7 | A0A2S4Q2A6 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.996 |
EPUL_000056 | YTM1 | A0A2S4Q2C7 | A0A2S4PZC9 | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.487 |
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