STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEI82183.1Photosynthetic protein synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
OEI82182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.921
OEI82184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.851
OEI79056.1
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.850
OEI82181.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.825
OEI82186.1
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.738
OEI80992.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.668
OEI78784.1
Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.647
OEI81277.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.640
OEI81159.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.617
OEI82185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
Your Current Organism:
Formosa algae
NCBI taxonomy Id: 225843
Other names: CIP 107684, F. algae, Formosa algae Ivanova et al. 2004 emend. Nedashkovskaya et al. 2006, KCTC 12364, KMM 3553
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