STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEI81866.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)    
Predicted Functional Partners:
OEI81981.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.984
OEI79696.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.966
OEI79627.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.952
OEI81865.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
OEI79457.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
OEI78878.1
Protein translocase subunit SecDF; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.473
OEI79242.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
OEI79008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.415
OEI81903.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.403
Your Current Organism:
Formosa algae
NCBI taxonomy Id: 225843
Other names: CIP 107684, F. algae, Formosa algae Ivanova et al. 2004 emend. Nedashkovskaya et al. 2006, KCTC 12364, KMM 3553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.