STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEI81787.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (935 aa)    
Predicted Functional Partners:
OEI81785.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.842
OEI81786.1
SusC/RagA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.830
OEI81783.1
Glucan endo-1,3-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
OEI81784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.753
OEI78814.1
Carbohydrate-binding protein SusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
OEI81841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.692
OEI78813.1
SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
OEI81782.1
Glycosyl hydrolase family 17; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.581
OEI81779.1
Sugar:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.547
OEI81778.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.515
Your Current Organism:
Formosa algae
NCBI taxonomy Id: 225843
Other names: CIP 107684, F. algae, Formosa algae Ivanova et al. 2004 emend. Nedashkovskaya et al. 2006, KCTC 12364, KMM 3553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.