Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sps_00276 | Sps_00277 | PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.979 |
Sps_00276 | Sps_00278 | PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hypothetical protein. | 0.741 |
Sps_00277 | Sps_00276 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.979 |
Sps_00277 | Sps_00278 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.960 |
Sps_00277 | Sps_00279 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.420 |
Sps_00277 | Sps_01552 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family. | 0.532 |
Sps_00277 | Sps_03024 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative silver efflux pump; PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.872 |
Sps_00277 | Sps_04772 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | PFAM: MacB-like periplasmic core domain; FtsX-like permease family. | 0.531 |
Sps_00277 | Sps_04773 | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | PFAM: MacB-like periplasmic core domain; FtsX-like permease family. | 0.529 |
Sps_00278 | Sps_00276 | Hypothetical protein. | PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.741 |
Sps_00278 | Sps_00277 | Hypothetical protein. | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.960 |
Sps_00278 | Sps_00279 | Hypothetical protein. | Hypothetical protein. | 0.438 |
Sps_00278 | Sps_00280 | Hypothetical protein. | PFAM: Uncharacterized protein conserved in bacteria (DUF2057). | 0.427 |
Sps_00278 | Sps_01552 | Hypothetical protein. | ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family. | 0.529 |
Sps_00278 | Sps_01901 | Hypothetical protein. | PFAM: Cytochrome c554 and c-prime; 'TIGRFAM: decaheme c-type cytochrome, OmcA/MtrC family'. | 0.415 |
Sps_00278 | Sps_03024 | Hypothetical protein. | Putative silver efflux pump; PFAM: AcrB/AcrD/AcrF family; 'TIGRFAM: heavy metal efflux pump, CzcA family'; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.597 |
Sps_00278 | Sps_04772 | Hypothetical protein. | PFAM: MacB-like periplasmic core domain; FtsX-like permease family. | 0.529 |
Sps_00278 | Sps_04773 | Hypothetical protein. | PFAM: MacB-like periplasmic core domain; FtsX-like permease family. | 0.529 |
Sps_00279 | Sps_00277 | Hypothetical protein. | PFAM: HlyD family secretion protein; 'TIGRFAM: RND family efflux transporter, MFP subunit'; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.420 |
Sps_00279 | Sps_00278 | Hypothetical protein. | Hypothetical protein. | 0.438 |
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