STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sps_03426Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: [2Fe-2S] binding domain. (177 aa)    
Predicted Functional Partners:
Sps_03427
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase.
 
 
 0.997
Sps_01712
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase.
 
 
 0.974
Sps_03424
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; PFAM: XdhC Rossmann domain; XdhC and CoxI family.
 
  
 0.959
Sps_01715
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; PFAM: XdhC Rossmann domain; XdhC and CoxI family.
 
  
 0.823
Sps_03425
Cytochrome c, mono- and diheme variants family; 'PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III'.
  
  
 0.818
Sps_01110
Molybdenum cofactor sulfurylase; PFAM: XdhC Rossmann domain; XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC.
 
  
 0.776
Sps_01111
'PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain'; 'TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit'.
 
     0.760
Sps_01714
Putative MobA-like protein; PFAM: MobA-like NTP transferase domain.
 
  
 0.730
Sps_03568
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 
 0.427
Sps_03423
Putative phosphatase; PFAM: Bacterial protein of unknown function (DUF839).
       0.411
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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