Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sps_00736 | Sps_03160 | Arylsulfatase A family protein; PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: Sulfatase. | 0.583 |
Sps_00736 | Sps_04012 | Arylsulfatase A family protein; PFAM: Sulfatase. | PFAM: Sulfatase. | 0.444 |
Sps_00736 | Sps_04019 | Arylsulfatase A family protein; PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: Sulfatase. | 0.543 |
Sps_00736 | Sps_04020 | Arylsulfatase A family protein; PFAM: Sulfatase. | Hypothetical protein. | 0.676 |
Sps_00736 | Sps_04021 | Arylsulfatase A family protein; PFAM: Sulfatase. | TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding SPASM domain. | 0.674 |
Sps_00736 | Sps_04025 | Arylsulfatase A family protein; PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: C-terminal region of aryl-sulfatase; Sulfatase. | 0.517 |
Sps_00736 | Sps_04531 | Arylsulfatase A family protein; PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: C-terminal region of aryl-sulfatase; Sulfatase. | 0.569 |
Sps_00835 | Sps_04021 | Hypothetical protein. | TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding SPASM domain. | 0.579 |
Sps_00835 | Sps_04667 | Hypothetical protein. | Colicin V processing peptidase; PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family. | 0.494 |
Sps_02946 | Sps_04020 | PFAM: YHYH protein. | Hypothetical protein. | 0.595 |
Sps_02946 | Sps_04021 | PFAM: YHYH protein. | TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding SPASM domain. | 0.595 |
Sps_03160 | Sps_00736 | Arylsulfatase A family protein; PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: Sulfatase. | 0.583 |
Sps_03160 | Sps_04012 | Arylsulfatase A family protein; PFAM: Sulfatase. | PFAM: Sulfatase. | 0.781 |
Sps_03160 | Sps_04020 | Arylsulfatase A family protein; PFAM: Sulfatase. | Hypothetical protein. | 0.841 |
Sps_03160 | Sps_04021 | Arylsulfatase A family protein; PFAM: Sulfatase. | TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding SPASM domain. | 0.853 |
Sps_04012 | Sps_00736 | PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: Sulfatase. | 0.444 |
Sps_04012 | Sps_03160 | PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: Sulfatase. | 0.781 |
Sps_04012 | Sps_04020 | PFAM: Sulfatase. | Hypothetical protein. | 0.845 |
Sps_04012 | Sps_04021 | PFAM: Sulfatase. | TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding SPASM domain. | 0.884 |
Sps_04019 | Sps_00736 | Arylsulfatase A family protein; PFAM: Sulfatase. | Arylsulfatase A family protein; PFAM: Sulfatase. | 0.543 |
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