STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sps_05175Dipeptidyl-peptidase 7; PFAM: Peptidase S46. (740 aa)    
Predicted Functional Partners:
Sps_00760
Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat.
  
     0.697
Sps_01853
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.543
Sps_01157
Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.542
Sps_05174
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
       0.542
Sps_04770
'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS domain'.
  
     0.541
Sps_04947
Dipeptidyl-peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
     0.502
Sps_04608
Dipeptide/tripeptide permease; PFAM: Major Facilitator Superfamily.
  
     0.496
Sps_01191
PFAM: Major Facilitator Superfamily.
  
     0.478
Sps_02198
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.475
Sps_01291
PFAM: Methyltransferase domain.
  
    0.474
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.