Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sps_00107 | Sps_03804 | Sps_00107 | Sps_03804 | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.906 |
Sps_00107 | Sps_05409 | Sps_00107 | Sps_05409 | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | PFAM: AAA domain. | 0.503 |
Sps_00186 | Sps_05409 | Sps_00186 | Sps_05409 | PFAM: Thioesterase-like superfamily. | PFAM: AAA domain. | 0.656 |
Sps_01187 | Sps_05409 | Sps_01187 | Sps_05409 | PFAM: Haemolysin-III related; 'TIGRFAM: channel protein, hemolysin III family'. | PFAM: AAA domain. | 0.598 |
Sps_03804 | Sps_00107 | Sps_03804 | Sps_00107 | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.906 |
Sps_03804 | Sps_05409 | Sps_03804 | Sps_05409 | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | PFAM: AAA domain. | 0.503 |
Sps_05408 | Sps_05409 | Sps_05408 | Sps_05409 | PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam). | PFAM: AAA domain. | 0.708 |
Sps_05408 | Sps_05412 | Sps_05408 | Sps_05412 | PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam). | Type IV pilus secretin PilQ/competence protein; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ. | 0.418 |
Sps_05408 | aroB | Sps_05408 | Sps_05410 | PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam). | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.736 |
Sps_05408 | aroK | Sps_05408 | Sps_05411 | PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam). | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.637 |
Sps_05409 | Sps_00107 | Sps_05409 | Sps_00107 | PFAM: AAA domain. | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.503 |
Sps_05409 | Sps_00186 | Sps_05409 | Sps_00186 | PFAM: AAA domain. | PFAM: Thioesterase-like superfamily. | 0.656 |
Sps_05409 | Sps_01187 | Sps_05409 | Sps_01187 | PFAM: AAA domain. | PFAM: Haemolysin-III related; 'TIGRFAM: channel protein, hemolysin III family'. | 0.598 |
Sps_05409 | Sps_03804 | Sps_05409 | Sps_03804 | PFAM: AAA domain. | PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.503 |
Sps_05409 | Sps_05408 | Sps_05409 | Sps_05408 | PFAM: AAA domain. | PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam). | 0.708 |
Sps_05409 | Sps_05412 | Sps_05409 | Sps_05412 | PFAM: AAA domain. | Type IV pilus secretin PilQ/competence protein; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ. | 0.502 |
Sps_05409 | aroB | Sps_05409 | Sps_05410 | PFAM: AAA domain. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.875 |
Sps_05409 | aroK | Sps_05409 | Sps_05411 | PFAM: AAA domain. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.777 |
Sps_05409 | nusA | Sps_05409 | Sps_04248 | PFAM: AAA domain. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.629 |
Sps_05409 | pnp | Sps_05409 | Sps_04241 | PFAM: AAA domain. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.540 |
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